NPS@ is the IBCP contribution to PBIL in Lyon, France

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Tuesday, June 6th 2000 : Bacillus subtilis protein sequence databank added (see news)

BLASTP results for : UNK_8367440

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First step : sequences before [go to EXTRACT]. You can also select/unselect sequence by clicking on checkbox below after SELECT and before EXTRACT.
                                                                        Score     E
Sequences producing significant alignments:                             (bits)  Value

 NPSA sw||ALR_SYNY3 ALANINE RACEMASE (EC 5.1.1.1).                         190  7e-48
 NPSA swnew||ALR2_BACSU PUTATIVE ALANINE RACEMASE (EC 5.1.1.1).            176  9e-44
 NPSA sw||ALR_BACST ALANINE RACEMASE (EC 5.1.1.1).                         173  1e-42
 NPSA swnew||ALR_LISMO ALANINE RACEMASE (EC 5.1.1.1).                      172  2e-42
 NPSA sw||ALR_HELPY ALANINE RACEMASE (EC 5.1.1.1).                         171  5e-42
 NPSA sw||ALR_BACSU ALANINE RACEMASE (EC 5.1.1.1).                         167  6e-41
 NPSA swnew||ALR_BORBU ALANINE RACEMASE (EC 5.1.1.1).                      165  2e-40
 NPSA swnew||ALR_STAAU ALANINE RACEMASE (EC 5.1.1.1).                      159  2e-38
 NPSA swnew||ALR_AQUAE ALANINE RACEMASE (EC 5.1.1.1).                      150  9e-36
 NPSA sw||ALR_LACPL ALANINE RACEMASE (EC 5.1.1.1).                         146  2e-34
 NPSA swnew||ALR_TREPA ALANINE RACEMASE (EC 5.1.1.1).                      132  2e-30
 NPSA sw||ALR1_ECOLI ALANINE RACEMASE, BIOSYNTHETIC (EC 5.1.1.1).          129  1e-29
 NPSA sw||ALR_MYCSM ALANINE RACEMASE (EC 5.1.1.1).                         128  4e-29
 NPSA swnew||ALR_HAEIN ALANINE RACEMASE (EC 5.1.1.1).                      128  4e-29
 NPSA sw||ALR1_SALTY ALANINE RACEMASE, BIOSYNTHETIC (EC 5.1.1.1).          123  1e-27
 NPSA swnew||ALR_MYCTU ALANINE RACEMASE (EC 5.1.1.1).                      123  1e-27
 NPSA swnew||ALR_MYCLE ALANINE RACEMASE (EC 5.1.1.1).                      121  4e-27
 NPSA swnew||ALR_STRCO ALANINE RACEMASE (EC 5.1.1.1).                      120  1e-26
 NPSA sw||ALR2_SALTY ALANINE RACEMASE, CATABOLIC (EC 5.1.1.1).             116  1e-25
 NPSA sw||ALR2_KLEAE ALANINE RACEMASE, CATABOLIC (EC 5.1.1.1).             113  9e-25
 NPSA swnew||ALR_RICPR ALANINE RACEMASE (EC 5.1.1.1).                      112  3e-24
 NPSA swnew||ALR2_ECOLI ALANINE RACEMASE, CATABOLIC (EC 5.1.1.1).          108  4e-23
 NPSA sw||ALR_STRPN ALANINE RACEMASE (EC 5.1.1.1) (FRAGMENT).               73  3e-12
 NPSA sw||YIAH_ECOLI HYPOTHETICAL 37.6 KD PROTEIN IN GLYQ-XYLB INTERG...    42  0.004
 NPSA sw||CARE_STRTH 4"-MYCAROSYL ISOVALERYL-COA TRANSFERASE (EC 2.-....    42  0.005
 NPSA sw||NODX_RHILV NODULATION PROTEIN X (PROBABLE SUGAR ACETYLASE).       36  0.20
 NPSA sw||SG13_CAEEL SRG-13 PROTEIN.                                        34  1.3
 NPSA sw||DPO1_BACCA DNA POLYMERASE I (EC 2.7.7.7) (POL I).                 34  1.3
 NPSA sw||LYSP_ECOLI LYSINE-SPECIFIC PERMEASE.                              32  4.0
 NPSA sw||MSMG_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PERMEASE...    31  6.8
 NPSA sw||HCY_OCTDO HEMOCYANIN, UNITS ODE TO ODG (FRAGMENT).                31  6.8
 NPSA sw||ACO2_SYNY3 ACONITATE HYDRATASE 2 (EC 4.2.1.3) (CITRATE HYDR...    31  6.8
 NPSA swnew||HCYA_OCTDO HEMOCYANIN A-TYPE, UNITS ODE TO ODG (FRAGMENT).     31  6.8
 NPSA sw||GTR2_LEIDO MEMBRANE TRANSPORTER D2.                               31  8.9

Total number of displayed sequences (E lesser or equal to 10) : 34
Total number of selected sequences
   (E lesser or equal to 1e-06, matching residues 1-711 of query) : 23

Second step : for selected sequences above : [
back to SELECT] For partial extraction : extract sequence with at least residues in matching region 1-711 (711 residues) of query.
Add query sequence to created database.
Remove identical sequences in created database.

Information and statistics : [BLASTP]
Homology search result file (text): [BLASTP]
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Comments. Last modified: Thu Jun 15 04:23:51 2000. Current time: Thu Jun 15 04:23:51 2000