NPS@ similarity search results

NPS@ is the IBCP contribution to PBIL in Lyon, France

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Tuesday, June 6th 2000 : Bacillus subtilis protein sequence databank added (see news)

BLASTP results for : UNK_9737590

View BLASTP in: [MPSA (Mac, UNIX) , About...] [AnTheProt (PC) , Download...] [HELP]

View graphic in : [MPSA] [AnTheProt]

First step : sequences before [go to EXTRACT].

with E threshold lesser or equal to
and matching any residue from to of query sequence.

You can also select/unselect sequence by clicking on checkbox below after SELECT and before EXTRACT.

                                                                        Score     E
Sequences producing significant alignments:                             (bits)  Value

 NPSA nrl3d||1TDJ biothreonine deaminase (EC 4.2.1.16) - Escherichia ...   123  6e-29
 NPSA nrl3d||1OASB o-acetylserine sulfhydrylase (EC 4.2.99.8), chain ...    42  3e-04
 NPSA nrl3d||1OASA o-acetylserine sulfhydrylase (EC 4.2.99.8), chain ...    42  3e-04

Total number of displayed sequences (E lesser or equal to 10) : 3
Total number of selected sequences
   (E lesser or equal to 1e-06, matching residues 1-339 of query) : 1

Second step : for selected sequences above : [back to SELECT]

Full sequences from database
Partial sequences from blastp alignments

For partial extraction : extract sequence with at least residues in matching region 1-339 (339 residues) of query.
Add query sequence to created database.
Remove identical sequences in created database.

Information and statistics : [BLASTP]

Homology search result file (text): [BLASTP]

This service is supported by MESR (ACC-SV13), CNRS (IMABIO, COMI, GENOME) and Région Rhône-Alpes (Programme EMERGENCE)
Comments. Last modified: Sat Jun 17 08:26:45 2000. Current time: Sat Jun 17 08:26:45 2000